Context-dependent conformation of diethylglycine residues in peptides

Citation
R. Kaul et al., Context-dependent conformation of diethylglycine residues in peptides, J PEPT RES, 55(4), 2000, pp. 271-278
Citations number
28
Categorie Soggetti
Biochemistry & Biophysics
Journal title
JOURNAL OF PEPTIDE RESEARCH
ISSN journal
1397002X → ACNP
Volume
55
Issue
4
Year of publication
2000
Pages
271 - 278
Database
ISI
SICI code
1397-002X(200004)55:4<271:CCODRI>2.0.ZU;2-S
Abstract
Diethylglycine (Deg) residues incorporated into peptides can stabilize full y extended (C-5) or helical conformations. The conformations of three tetra peptides Boc-Xxx-Deg-Xxx-Deg-OMe (Xxx-Gly, GD4; Leu, LD4 and Pro, PD4) have been investigated by NMR. In the Gly and Leu peptides, NOE data suggest th at the local conformations at the Deg residues are fully extended. Low temp erature coefficients for the Deg(2) and Deg(4) NH groups are consistent wit h their inaccessibility to solvent, in a C-5 conformation. NMR evidence sup ports a folded beta-turn conformation involving Deg(2)-Gly(3), stabilized b y a 4 --> 1 intramolecular hydrogen bond between Pro(1) CO and Deg(4) NH in the proline containing peptide (PD4). The crystal structure of GD4 reveals a hydrated multiple turn conformation with Gly(1)-Deg(2) adopting a distor ted type II/II' conformation, while the Deg(2)-Pro(3) segment adopts a type III/III' structure. A lone water molecule is inserted into the potential 4 --> 1 hydrogen bond of the Gly(1)-Deg(2) beta-turn.