R. Jankowiak et al., CONFORMATIONAL STUDIES OF STEREOISOMERIC TETROLS DERIVED FROM SYN-DIBENZO[A,L] AND ANTI-DIBENZO[A,L] PYRENE DIOL EPOXIDES, Chemical research in toxicology, 10(6), 1997, pp. 677-686
An understanding of the conformational behavior of the stereoisomeric
tetrols at the 11,12,13,14-positions of dibenzo[a,l]pyrene (DB[a,l]P)
is essential for the spectroscopic identification of DNA adducts deriv
ed from the biologically highly active fjord region syn- and anti-DB[a
,l]P-11,12-diol 13,14-epoxides. Conformational effects are expected to
play an important role in DNA-DB[a,l]P diol epoxide reactivity, base-
sequence specificity, and conformation dependent repair. The results o
f conformational studies on trans-anti-, cis-anti-, and cis-syn-DB[a,l
]P tetrol isomers are presented and compared to the results obtained p
reviously for trans-syn-DB[a,l]P tetrol (Carcinogenesis 17, 829-837, 1
996). Molecular mechanics, dynamical simulations, and semiempirical ca
lculations of electronic transitions are used to interpret the low-tem
perature fluorescence spectra and H-1 NMR data. Molecular dynamics sim
ulations (in vacuo) identified two conformers (I and II) for each of t
he tetrol isomers; in all conformations the aromatic ring system is se
verely distorted. Fluorescence line-narrowing (FLN) spectroscopy ident
ified tyro distinct conformational species for the trans-anti isomer,
one occurring in ethanol and the other occurring in a glycerol/water m
atrix. The corresponding structures are assigned based on the S-1 <--
S-0 transition energies calculated for conformers I and II, respective
ly. H-1 NMR spectroscopy confirmed the structure of conformer I at roo
m temperature. In contrast to trans-syn-DB[a,l]P tetrol (where the maj
or conformation was identified as a boat structure), both conformation
s of trans-anti-DB[a,l]P tetrol feature a half-chair structure for the
cyclohexenyl ring with different orientations of the hydroxyl groups.
For cis-anti- and cis-syn-DB[a,l]P tetrols, only a single conformer i
s detected by FLN spectroscopy. The NMR results for the latter appear
to be most consistent with a mixture of two half-chair conformers I an
d II, while for the cis-anti isomer a flattened, boatlike conformation
was observed. The generally good agreement between the NMR coupling c
onstants and those estimated theoretically indicates that these struct
ures should serve as good starting points for spectroscopic or computa
tional studies of DNA adducts derived from DB[a,l]P diol epoxides.