Currently, the phylum Gastrotricha is divided into the orders Macrodasyida
and Chaetonotida, with the structure of the myoepithelial pharynx being an
important distinguishing feature. Macrodasyida currently has six recognized
families, and Chaetonotida comprises seven families. However, within-group
relationships are poorly understood. To arrive at a better understanding o
f gastrotrich systematics and phylogeny, we performed the first cladistic a
nalysis of nearly all known gastrotrich genera using 71 morphological chara
cters. Results suggest that the Gastrotricha is a monophyletic group (suppo
rted by 82% of bootstrap replications) with its most primitive taxa distrib
uted among the families Dactylopodolidae and Neodasyidae, Monophyly of Macr
odasyida and Chaetonotida was supported by 90% and 52% bootstrap replicatio
ns, respectively. Within the Macrodasyida, the families Dactylopodolidae, T
urbanellidae, Macrodasyidae, and Thaumastodermatidae all formed monophyleti
c clades. The families Planodasyidae and Lepidodasyidae were paraphyletic.
Among the Chaetonotida, the marine family Xenotrichulidae was monophyletic,
supported by 51% of bootstrap replications. A second clade containing all
freshwater families was supported by 62% bootstrap values. However, Chaeton
otidae were paraphyletic. Using this analysis as a framework, we now can ex
plore possible patterns of evolution within it, and arrive at a consensus o
f the gastrotrich ground pattern. Moreover, in future molecular studies of
metazoan phylogeny, we will be able to select gastrotrich species that are
more appropriate representatives of the phylum.