Characterization of the Saccharomyces cerevisiae cyclic nucleotide phosphodiesterase involved in the metabolism of ADP-ribose 1 '',2 ''-cyclic phosphate
F. Nasr et W. Filipowicz, Characterization of the Saccharomyces cerevisiae cyclic nucleotide phosphodiesterase involved in the metabolism of ADP-ribose 1 '',2 ''-cyclic phosphate, NUCL ACID R, 28(8), 2000, pp. 1676-1683
ADP-ribose 1 ",2 "-cyciic phosphate (Appr>p) is produced in yeast and other
eukaryotes as a consequence of tRNA splicing. This molecule is converted t
o ADP-ribose 1 "-phosphate (Appr-1 " p) by the action of the cyclic nucleot
ide phosphodiesterase (CPDase), Comparison of the previously cloned CPDase
from Arabidopsis with proteins having related cyclic phosphodiesterase or R
NA ligase activities revealed two histidine-containing tetrapeptides conser
ved in these enzyme families, Using the consensus phosphodiesterase signatu
re, we have identified the yeast Saccharomyces cerevisiae open reading fram
e YGR247w as encoding CPDase, The bacterially expressed yeast protein, name
d Cpd1p, is able to hydrolyze Appr>p to Appr-1 " p, Moreover, as with the p
reviously characterized Arabidopsis and wheat CPDases, Cpd1p hydrolyzes nuc
leosides 2',3'-cyclic phosphates (N>p) to nucleosides 2'-phosphates. Appare
nt K-m values for Appr>p, A>p, U>p, C>p and G>p are 0.37, 4.97, 8.91, 12.18
and 14.29 mM, respectively, Site-directed mutagenesis of individual amino
acids within the two conserved tetrapeptides showed that H-40 and H-150 res
idues are essential for CPDase activity, Deletion analysis has indicated th
at the CPD1 gene is not important for cellular viability, Likewise, overexp
ression of Cpd1p had no effect on yeast growth, These results do not implic
ate an important role for Appr>p or Appr-1 " p in yeast cells grown under s
tandard laboratory conditions.