Software for analysis of bacterial genomes

Citation
Aa. Mironov et al., Software for analysis of bacterial genomes, MOL BIOL, 34(2), 2000, pp. 222-231
Citations number
15
Categorie Soggetti
Molecular Biology & Genetics
Journal title
MOLECULAR BIOLOGY
ISSN journal
00268933 → ACNP
Volume
34
Issue
2
Year of publication
2000
Pages
222 - 231
Database
ISI
SICI code
0026-8933(200003/04)34:2<222:SFAOBG>2.0.ZU;2-8
Abstract
GenomeExplorer is a program for comparative analysis of regulation in proka ryotic genomes. The program has options for signal search, comparison of ge ne samples, search for paralogs and orthologs, iterative construction of si gnal profiles. The program has a convenient graphic interface, allowing for navigation in the annotation window, in the genome map, and in the table o f gene similarities. The use of the system clipboard allows one to export t he results of analysis into Word and Excel, and to call external programs v ia the Internet.