DNA methylation is associated with the silencing of gene expression. The pr
edominant mechanism involves the methylation of DNA and the subsequent recr
uitment of binding proteins that preferentially recognize methylated DNA. I
n turn, these proteins associate with histone deacetylase and chromatin rem
odelling complexes to cause the stabilization of condensed chromatin. Recen
t studies have indicated that the opposite might also hold; namely, that ta
rgeting of methylation might depend on altered chromatin structure. The fam
ily of methyltransferases and methyl-binding proteins is expanding and beco
ming better characterized. This review will focus on the mechanisms of meth
ylation-associated silencing of gene expression.