A new model, CCBATCH, comprehensively couples microbially catalyzed reactio
ns to aqueous geochemistry. The effect of aqueous speciation on biodegradat
ion reactions and the effect of biological reactions on the concentration o
f chemical species (e.g. H2CO3, NH4+, O-2) are explicitly included in CCBAT
CH, allowing systematic investigation of kinetically controlled biological
reactions. Bulk-phase chemical speciation reactions including acid/base and
complexation are modeled as thermodynamically controlled, while biological
reactions are modeled as kinetically controlled. A dual-Monod kinetic form
ulation for biological degradation reactions is coupled with stoichiometry
for the degradation reaction to predict the rate of change of all biologica
l and chemical species affected by the biological reactions. The capability
of CCBATCH to capture pH and speciation effects on biological reactions is
demonstrated by a series of modeling examples for the citrate/Fe(III) syst
em. pH controls the concentration of potentially biologically available for
ms of citrate. When the percentage of the degradable substrate is low due t
o complexation or acid/base speciation, degradation rates may be slow despi
te high concentrations of substrate Complexation reactions that sequester s
ubstrate in non-degradable forms may prevent degradation or stop degradatio
n reactions prior to complete substrate utilization. The capability of CCBA
TCH to couple aqueous speciation changes to biodegradation reaction kinetic
s and stoichiometry allows prediction of these key behaviors in mixed metal
/chelate systems.