5-Bromo-2'-deoxyuridine (BrdU) is frequently used to measure the turnover o
f cell populations in vivo. However, due to a lack of detailed mathematical
models that describe the uptake and loss of BrdU in dividing cell populati
ons, assessments of cell turnover kinetics have been largely qualitative ra
ther than quantitative. In this study, we develop a mathematical framework
for the analysis of BrdU-labeling experiments. We derive analytical express
ions for the fraction of labeled cells within cell populations that are gro
wing, declining, or at equilibrium. Fitting the analytical functions to dat
a allows us to quantify the rates of cell proliferation and cell loss, as w
ell as the rate of cell input from a source. We illustrate this far the Brd
U labeling of T lymphocytes of uninfected and SIV-infected rhesus macaques.