Mixtures of the microheterogeneous 16-mer peptaibol antibiotics called anti
amoebins (AAM) have been isolated from the culture broths of strains of the
filamentous fungi Stilbella erythrocephala ATCC 28144, Stilbeila fimetaria
CBS 548.84 and Gliocladium catenulatum CBS 511.66. Sequences were determin
ed using on-line HPLC together with positive- and negative-ion electrospray
ionization mass spectrometry. Some characteristic features are recognized
in the mass spectrometric fragmentation pattern of AAM. From a sample origi
nally used for sequencing AAM (from Hindustan Antibiotics, Ltd., Pimpri, Po
ona-411018, India), and a sample of AAM commercially available (from Sigma
Chemicals, St. Louis, MO, USA) HPLC elution profiles and sequences were ass
igned. Further, sequences of AAM previously isolated from Emericellopsis sy
nnematicola CBS 176.60 and Emericellopsis salmosynnemata CBS 382.62 were de
termined. The peptide designated AAM I was the most abundant in all isolate
s and its structure could be confirmed. AAM II was detectable as a minor co
mponent (1.9%) only in the original sample of AAM, but not in the other iso
lates. The structures of AAM III, IV and V, which had previously been partl
y assigned, were definitely established, and the new sequences AAM VI-XVI w
ere elucidated. AAM showing Phe(1)/Leu(1) or Phe(1)/Val(1) exchange, respec
tively, are produced in amounts only by S. erythrocephala. Sequences, HPLC
elution profiles ('fingerprints') and relative amounts of peptides of all i
solates were correlated. Copyright (C) 2000 European Peptide Society and Jo
hn Wiley & Sons, Ltd.