We have previously demonstrated an HLA0101null allele segregating in
a family with the HLA-B8, -Cw7, -DR3, -DR52, -DQ2 haplotype. In the pr
esent study the regulatory elements with known transcription enhanceme
nt activity of the silenced HLA-A0101 allele were analyzed. In the en
hancer B element, a T was substituted for a C at position -106, wherea
s no other alterations were found in the adjacent 5' section of the HL
A-A0101null allele. This substitution was not seen in the enhancer B
elements of the corresponding genes involved in normal HLA-A0101 memb
rane expression. Comparison of enhancer B element sequences of classic
al functional major histocompatibility complex (MHC) class I alleles d
emonstrated a high degree of conservation. In contrast, many MHC class
I pseudogenes showed mutation in their enhancer B boxes. These result
s may indicate that the single mutation detected in the enhancer B ele
ment plays a pivotal role in the abolishment of membrane expression of
the HLA-A0101null allele.