Phylogenetic relationships among species of Citrullus and the placement ofC-rehmii De Winter as determined by Internal Transcribed Spacer (ITS) sequence heterogeneity

Citation
Rl. Jarret et M. Newman, Phylogenetic relationships among species of Citrullus and the placement ofC-rehmii De Winter as determined by Internal Transcribed Spacer (ITS) sequence heterogeneity, GEN RESOUR, 47(2), 2000, pp. 215-222
Citations number
29
Categorie Soggetti
Plant Sciences
Journal title
GENETIC RESOURCES AND CROP EVOLUTION
ISSN journal
09259864 → ACNP
Volume
47
Issue
2
Year of publication
2000
Pages
215 - 222
Database
ISI
SICI code
0925-9864(200004)47:2<215:PRASOC>2.0.ZU;2-T
Abstract
The internal transcribed spacer regions (ITS1 and ITS2) of the 18S-25S nucl ear ribosomal DNA from the four recognized species of Citrullus (C. lanatus var. lanatus (Thunb.) Matsum. & Nakai., C. lanatus var. citroides (Bailey) Mansf., C. colocynthis (L.) Schrad., C. ecirrhosus Cogn., and C. rehmii De Winter) and Acanthosicycos naudinianus (Sond.) C. Jeffrey were amplified b y PCR, and direct sequenced. Within the taxa examined, the length of ITS1 v aried from 216 bp to 219 bp, and ITS2 varied from 239 bp to 249 bp. The ave rage %CG content ranged from 59 to 64% and from 62 to 66% for ITS1 and ITS2 , respectively. The greater length variation observed in ITS2 was primarily attributable to the occurrence of a (CC)(n) microsatellite. Cladistic (PAU P) and phenetic (MEGA) analyses resulted in highly resolutive trees. ITS se quence analysis placed the recently described C. rehmii adjacent to the cul tivated watermelon and supported the validity of the species classification of this taxa.