A genetic algorithm for low resolution protein structure determination

Citation
P. Chacon et al., A genetic algorithm for low resolution protein structure determination, J CHEM S P, 21(3), 1999, pp. 259-267
Citations number
26
Categorie Soggetti
Chemistry
Journal title
JOURNAL OF THE CHEMICAL SOCIETY OF PAKISTAN
ISSN journal
02535106 → ACNP
Volume
21
Issue
3
Year of publication
1999
Pages
259 - 267
Database
ISI
SICI code
0253-5106(199909)21:3<259:AGAFLR>2.0.ZU;2-E
Abstract
A genetic algorithm for iterative fitting of SAXS data is presented. The al gorithm described produces fast convergence to a fittest model mass distrib ution compatible with experimental data. This method affords a dramatic red uction of processor time required by other SAXS fitting methods and can be applied to any kind of structure, the only requirement is the target profil e. The effectiveness of the procedure is demonstrated with synthetic object s and by deriving the low resolution model of a known protein structure fro m their corresponding computed SAXS profile.