Species independence of mutual information in coding and noncoding DNA

Citation
I. Grosse et al., Species independence of mutual information in coding and noncoding DNA, PHYS REV E, 61(5), 2000, pp. 5624-5629
Citations number
32
Categorie Soggetti
Physics
Journal title
PHYSICAL REVIEW E
ISSN journal
1063651X → ACNP
Volume
61
Issue
5
Year of publication
2000
Part
B
Pages
5624 - 5629
Database
ISI
SICI code
1063-651X(200005)61:5<5624:SIOMII>2.0.ZU;2-F
Abstract
We explore if there exist universal statistical patterns that are different in coding and noncoding DNA and can be found in all living organisms, rega rdless of their phylogenetic origin. We find that (i) the mutual informatio n function I has a significantly different functional form in coding and no ncoding DNA. We further find that (ii) the probability distributions of the average mutual information (I) over bar are significantly different in cod ing and noncoding DNA, while (iii) they are almost the same for organisms o f all taxonomic classes. Surprisingly, we find that (I) over bar is capable of predicting coding regions as accurately as organism-specific coding mea sures.