Genomic DNA fingerprinting of Oenococcus oeni strains by pulsed-field gel electrophoresis and randomly amplified polymorphic DNA-PCR

Citation
G. Zapparoli et al., Genomic DNA fingerprinting of Oenococcus oeni strains by pulsed-field gel electrophoresis and randomly amplified polymorphic DNA-PCR, CURR MICROB, 40(6), 2000, pp. 351-355
Citations number
16
Categorie Soggetti
Microbiology
Journal title
CURRENT MICROBIOLOGY
ISSN journal
03438651 → ACNP
Volume
40
Issue
6
Year of publication
2000
Pages
351 - 355
Database
ISI
SICI code
0343-8651(200006)40:6<351:GDFOOO>2.0.ZU;2-Z
Abstract
Genetic diversity of 60 Oenococcus oeni strains from different wines was ev aluated by numerical analysis of (i) pulsed-field gel electrophoresis (PFGE ) patterns with endonuclease ApaI and (ii) randomly amplified polymorphic D NA (RAPD)-PCR fingerprints with four oligonucleotide primers. Sixty-two per cent of the strains could be distinguished by PFGE, whereas most strains we re identified by distinct RAPD-PCR profiles and associated according to the geographical origin. Because of its rapidity and reliability, RAPD-PCR app eared to be a suitable method for typing and monitoring O, oeni strains in winemaking.