Kv. Shaitan et al., IMPORTANCE OF EFFECTIVE CHARGES IN THE ANALYSIS OF ELECTRON-CONFORMATIONAL INTERACTIONS IN PEPTIDES, Molecular biology, 31(1), 1997, pp. 90-97
Dependences of electron distributions on conformations of model dipept
ides and their water and glycerol complexes in ground electronic state
s are studied by nb initio quantum chemistry methods. The influence of
conformational distortions, hydrogen bonding, chemical group substitu
tions, and electron attachment on the effective atomic charges for a n
umber of dipeptides are analyzed. Various approaches to atomic charge
determination are considered. It is shown, that the ESP method of char
ge calculations is the most conformation-dependent approach and that o
ptimization of the molecular geometry reduces charge variations consid
erably.