Computational modeling of metalloporphyrin structure and vibrational spectra: Porphyrin ruffling in NiTPP

Citation
Ts. Rush et al., Computational modeling of metalloporphyrin structure and vibrational spectra: Porphyrin ruffling in NiTPP, J PHYS CH B, 104(20), 2000, pp. 5020-5034
Citations number
52
Categorie Soggetti
Physical Chemistry/Chemical Physics
Journal title
JOURNAL OF PHYSICAL CHEMISTRY B
ISSN journal
15206106 → ACNP
Volume
104
Issue
20
Year of publication
2000
Pages
5020 - 5034
Database
ISI
SICI code
1520-6106(20000525)104:20<5020:CMOMSA>2.0.ZU;2-1
Abstract
This study extends DFT-SQM (density functional theory-scaled quantum mechan ical) analysis to infrared and resonance Raman spectra of nickel(II) tetrap henylporphyrin (NiTPP), the largest molecular system so far analyzed with t his methodology. NiTPP is of interest because of extensive empirical studie s: its tendency to undergo porphyrin ruffling provides a way to model out-o f-plane distortions in heme proteins. This ruffling tendency is captured by DFT, which predicts imaginary frequencies for D-4h NiTPP, along coordinate s which lead to porphyrin ruffling and to phenyl rotation. Relaxation of sy mmetry constraints from D-4h lower the calculated energy by 0.61 kcal/mol f or a D-2d structure [phenyl rotation] and an additional 1.08 kcal/mol for a S-4 structure [ruffling]. The S-4 structure is supported unequivocally by the observed activation of two out-of-plane modes, gamma(12) and gamma(13), in the Soret-excited RR spectrum. Raman intensity calculations, employing an INDO-level evaluation of excited-state gradients, give the correct gamma (12) and gamma(13) magnitudes for the S-4 conformation. Deconvolution of th e Ni-N stretching RR band supports the population ratio [0.28] for planar [ D-4h + D-2d] and nonplanar [S-4] conformations which is expected on the bas is of the DFT energies. The computed frequencies and intensities permit ass ignment of all the RR bands, including several reassignments From previous studies, and of the IR spectrum. The previous NiTPP empirical force field h as also been refined. Our analysis illustrates the utility of DFT-SQM in ma king detailed connections between the metalloporphyrin structure and its vi brational spectra. This capability promises to yield precise determinations of heme protein structural variations using resonance Raman spectroscopy.