Millstone Hill ionospheric incoherent scatter radar data collected during J
une 5-11, 1991, are analyzed to determine F region neutral and ion composit
ion, density, and temperature. The 10.7-cm solar flux index was at the very
high level of 250, and the magnetic activity index Kp ranged up to the hig
hest possible level of 9 during this period, making it of particular intere
st for understanding: upper atmosphere behavior for such a nearly limiting
combination of conditions experienced by the thermosphere. We find that the
Mass Spectrometer Incoherent Scatter 86 (MSIS-86) model overestimates the
daytime exospheric temperature and the neutral O concentration for this hig
h level of solar activity. These results differ substantially from storm pe
riods analyzed previously. The ionospheric F region converts from largely a
tomic ions to largely molecular ions during the periods of strongest magnet
ic activity. We show that this condition leads to erroneous determination o
f neutral atmosphere parameters, including temperature, density, and drift;
velocity, if not accounted for in incoherent scatter data analysis.