The main problem in diagnosing anaerobic lower respiratory tract infections
is the differentiation between infection and contamination. The main sourc
es of samples are at risk of contamination. The principal sample sources ar
e from the bronchial tree; blood cultures are seldom positive and serology
is of no use. Fusobacterium, Prevotella and Streptococcus are all commensal
with buccopharyngeal flora and the main organisms in anaerobic pleuropulmo
nary infections. These bacteria are all very sensitive to dessication and t
he toxic action of oxygen. The overgrowth of a bacteria can avoid the devel
opment of the real pathogens. For all these reasons we recognize four steps
to optimizing the microbiological diagnosis: to achieve a good timing betw
een the clinical ward and the laboratory in order to provide specific trans
port means; to assure the best sampling possible, either thoracocentesis fo
r empyema, abscess and necrotizing pneumonia or protected distal sampling (
brush, lavage), and transtracheal or transthoracic aspiration for pneumonia
with quantitative cultures; to assure the transportation to the laboratory
in the best conditions and to avoid the loss of time; and to be critical a
bout the results with regard for the risk of contamination of the sample. (
C) 2000 Editions scientifiques et medicales Elsevier SAS.