One to three accessions of 22 Alstroemeria species, an interspecific hybrid
(A. aurea x A. inodora), and single accessions of Bomarea salsilla and Leo
ntochir ovallei were evaluated using the AFLP-marker technique to estimate
the genetic diversity within the genus Alstroemeria. Three primer combinati
ons generated 716 markers and discriminated all Alstroemeria species. The d
endrogram inferred from the AFLP fingerprints supported the conjecture of t
he generic separation of the Chilean and Brazilian Alstroemeria species. Th
e principal co-ordinate plot showed the separate allocation of the A. ligtu
group and the allocation of A. aurea, which has a wide range of geographic
al distribution and genetic variation, in the middle of other Alstroemeria
species. The genetic distances, based on AFLP markers, determined the genom
ic contribution of the parents to the interspecific hybrid.