Genetic classification of "Norwalk-like viruses"

Citation
T. Ando et al., Genetic classification of "Norwalk-like viruses", J INFEC DIS, 181, 2000, pp. S336-S348
Citations number
89
Categorie Soggetti
Clinical Immunolgy & Infectious Disease",Immunology
Journal title
JOURNAL OF INFECTIOUS DISEASES
ISSN journal
00221899 → ACNP
Volume
181
Year of publication
2000
Supplement
2
Pages
S336 - S348
Database
ISI
SICI code
0022-1899(200005)181:<S336:GCO"V>2.0.ZU;2-P
Abstract
Reverse transcription-polymerase chain reaction has been used worldwide for the diagnosis of Norwalk-like virus (NLV) infection, yet a commonly accept ed genetic classification scheme has not been established. Amino acid seque nces from four regions of open-reading frame 2 (ORF2) were used to analyze 101 NLV strains, including 2 bovine strains, On the basis of this analysis, a genetic classification scheme is proposed that differentiates 99 human s trains into 2 major genetic groups consisting of 5 and 10 genetic clusters, respectively. The 2 bovine strains constitute a newly defined third major genetic group composed of 2 putative clusters represented by each strain. T his classification scheme is well supported by the analysis of the entire O RF2 sequences from 38 strains selected to represent the genetic diversity o f the human strains used above. This scheme should provide a firm scientifi c basis for the unified classification of NLV strains detected around the w orld.