Rab is a family of small Ras-like GTPases regulating intracellular vesicle
transport. We have previously reported that prenylated Rab acceptor or PRA1
interacts with Rab GTPases and vesicle-associated membrane protein (VAMP2)
. Structural prediction programs suggest that PRA1, with its two extensive
hydrophobic domains, is likely to be an integral membrane protein. However,
subcellular fractionation and immunocytochemical analyses indicated that P
RA1 is localized both in the cytosol and tightly associated with the membra
ne compartment. The membrane bound form can be partially extracted with phy
siological buffer and urea, suggesting that PRA1 is an extrinsic membrane p
rotein. Deletion of the carboxyl-terminal domain resulted in a protein that
behaved as an integral membrane protein, indicating that this domain plays
an essential role in maintaining PRA1 in a soluble state. PRA1 can also bi
nd weakly to GDP dissociation inhibitor (GDI), a protein involved in the so
lubilization of membrane-bound Rab GTPases. Addition of PRA1 inhibited the
extraction of membrane-bound Rab3A by GDI, suggesting that membrane localiz
ation of Rab GTPases is dependent on the opposing action of PRA1 and GDI. T
he binding of Rab and VAMPS to PRA1 is mutually exclusive such that Rab3A c
an displace VAMPS in a preformed VAMP2-PRA1 complex.