Trypanosomes in the dissection-positive proboscis of Glossina pallidipes we
re identified by PCR using species-specific primers. Of the 3741 flies diss
ected 643 were proboscis positive. PCR was performed on 406 dissection-posi
tive probosces giving positive identifications in 352 (86.7%) and infection
rates of 14.8% for congolense-type infections, 2.8% for vivax-type infecti
ons and 1.4% for the unidentified group. Of the 352 PCR identified infectio
ns 225 were single, 111 were double, 13 were triple infections and there we
re 3 quadruple infections. Statistical analysis suggests that mixed infecti
ons group into 3 largely separate divisions among the tsetse population (i)
Trypanosoma congolense savannah and T. congolense Kenya coast, (ii) T. sim
iae, T. congolense Tsavo and T. godfreyi and (iii) T. vivax. We conclude th
at either differing feeding patterns among members of the fly population or
the ability of the trypanosomes in each of the infection categories to sig
nificantly influence the maturation of trypanosomes in the other categories
are the most likely causes of the groupings noted. Chi-squared analysis of
dissection and PCR methods of trypanosome identification revealed profound
differences (chi(2) = 19.1; D.F. = 1; P > 0.05). If confirmed in other stu
dies these findings have serious implications for our understanding of tryp
anosome epidemiology in tsetse flies, much of which is founded on data from
dissection-based trypanosome identifications.