The G-protein activators guanosine 5'-O-(3-thiodiphosphate) (GTP gamma S) a
nd aluminum fluoride (AIF) are thought to inhibit transport between Golgi c
isternae by causing the accumulation of nonfunctional coatomer-coated trans
port vesicles on the Golgi. Although GTP gamma S and AIF inhibit transport
in cell-free intra-Golgi transport systems, blocking coatomer vesicle forma
tion does not. We therefore determined whether inhibition of in vitro Golgi
transport by these agents requires coatomer vesicle formation. Depletion o
f coatomer was found to completely block coated vesicle formation on Golgi
cisternae without affecting inhibition of in vitro transport by either GTP
gamma S or AIF. Depletion of ADP-ribosylation factor (ARF) prevented inhibi
tion of transport by GTP gamma S. but not by Air, suggesting that the AIF-s
ensitive component in transport may not be a GTP-binding protein. Surprisin
gly, depletion of cytosolic ARF did not prevent the GTP gamma S-induced for
mation of Golgi-coated vesicles. whereas ARF was required for AIF-induced v
esicle formation. Although ARF or coatomer depletion caused an increase in
the fenestration of cisternae, no other utrastructural changes were observe
d that might explain the inhibition of transport by GTP gamma S or Air. The
se findings suggest that ARF-GTP gamma S and AIF act by distinct and coatom
er-independent mechanisms to inhibit membrane fusion in cell-free intra-Gol
gi transport.