The purpose of this study was to examine whether tumor DNA content correlat
ed with prognosis in nasopharyngeal carcinoma (NPC). DNA flow-cytometric an
alysis in fresh specimens of nasopharyngeal biopsy from 123 patients with c
linical suspicion of NPC was collected initially. Histopathologic study and
successful flow-cytometric analysis had 28 lymphoid hyperplasias and 87 NP
Cs. Seventeen NPC patients were treated elsewhere and were excluded. A tota
l of 98 patients, including 28 lymphoid hyperplasias and 70 NPCs, formed th
e materials of this study. There were 34 (49%) diploid and 36 (51%) aneuplo
id in NPC patients. No lymphoid hyperplasias were aneuploid. The mean of S-
phase fraction was higher in NPC than in lymphoid hyperplasia (P < .001), i
ndicating higher cellular activity in NPC. DNA content failed to associate
with age, gender, pathology, distant metastasis, and stage, indicating that
DNA content was an independent prognostic indicator and possibly a clinica
l parameter. The log rank test of overall survival curves was significant f
or stage (P = .002) and DNA ploidy (P = .042); it was almost significant fo
r S-phase fraction (P = .057). Because the follow-up duration was not long
enough, univariate and multivariate analysis were not significant for stage
, ploidy, and S-phase fraction, except for distant metastasis. It is also m
ost likely colinearity of clinical stage and distant metastasis that explai
ned why clinical stage could not show significance in prognosis. Interestin
gly, the DNA content appeared to be a potential prognostic parameter in ove
rall survival, although it was not statistically significant (P = .052). Ou
r data suggested that NPC patients with aneuploid DNA and high S-phase frac
tion tend to have poor prognosis and should be treated more aggressively, e
ven in the early stage of the disease.