A methodology for the configuration analysis of multi-configurational wave-
functions of a closed-shell system is presented. The molecular system is pa
rtitioned in interacting fragments, the molecular orbitals are expanded in
fragment orbitals and each Slater determinant is expanded in localized reac
tant electronic structures. Finally, to reduce the number of relevant coeff
icients, a transformation of orbitals is performed. The main advantage of e
mploying configuration analysis lays in its simplicity and compactness, spe
cially when extended basis sets are used. As a test, the wave-function at t
he transition state for some nucleophilic substitution reactions is analyze
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