We have sequenced and analyzed 8.3 kb of sequence adjacent and distal
to the human ribosomal DNA (rDNA); this distal sequence connects to th
e rDNA cluster just 4 kb upstream of the first promoter and is shared
among the acrocentric chromosomes and, at least in part, it is also pr
esent in other primates. The sequence differs in character from that o
f the rDNA intergenic spacer (IGS) in that it does not contain long st
retches of either polypyrimidine or polypurine. However, just like the
IGS, it contains numerous repetitive elements, including retroposed f
ragments of 28S rRNA and large pieces of the IGS. In addition, we show
that the rDNA clusters are not interrupted by other sequences and do
not recombine with this distal segment.