Steered molecular dynamics simulation of force-induced titin immunoglobulin
domain 127 unfolding led to the discovery of a significant potential energ
y barrier at an extension of similar to 14 Angstrom on the unfolding pathwa
y that protects the domain against stretching. Previous simulations showed
that this barrier is due to the concurrent breaking of six interstrand hydr
ogen bonds (H-bonds) between beta-strands A' and G that is preceded by the
breaking of two to three hydrogen bonds between strands A and B, the latter
leading to an unfolding intermediate. The simulation results are supported
by Angstrom-resolution atomic force microscopy data. Here we perform a str
uctural and energetic analysis of the H-bonds breaking. It is confirmed tha
t H-bonds between strands A and B break rapidly. However, the breaking of t
he H-bond between strands A' and G needs to be assisted by fluctuations of
water molecules. In nanosecond simulations, water molecules are found to re
peatedly interact with the protein backbone atoms, weakening individual int
erstrand H-bonds until all six A'-G H-bonds break simultaneously under the
influence of external stretching forces. Only when those bonds are broken c
an the generic unfolding take place, which involves hydrophobic interaction
s of the protein core and exerts weaker resistance against stretching than
the key event.