Density functional theory studies on the geometries and energies of the met
hylated derivatives of uracil yield two stable conformations, alpha and bet
a, for each single-methylated uracil. They are different in the spatial ori
entation of the substituting methyl group and the molecular total energy. A
nalyzing the calculated structural parameters, we also found an elongation
effect in the methylated uracil, which contributes to the increase of dipol
e moment and molecular size of molecules such as the methylated derivatives
of nucleic acid bases. (C) 2000 Elsevier Science B.V. All rights reserved.