The regulation of telomere length may be involved in the cellular physiolog
y of senescence, reproduction, cancer, immune response to infection, and po
ssibly immune deficiency. The measurement of telomere length, critical to r
esearch in this area, has traditionally been performed by Southern blot ana
lysis, which is cumbersome and time consuming. Several alternative methods
have been described in recent years. Some, such as pulsed-field electrophor
esis, slot blots, and centromere-to-telomere ratio measurements are essenti
ally improvements to the Southern blot technique. However, other methods su
ch as fluorescent in situ hybridization an metaphase chromosome spreads and
flow cytometry-based fluorescent in situ hybridization represent a complet
ely new technical approach to the problem. In this review, we compare metho
ds, with particular emphasis placed on flow cytometric techniques far measu
ring telomere length in situ and identifying potential areas where improvem
ents may still be made. Cytometry (Comm. Clin, Cytometry) 42: 159-164, 2000
. (C) 2000 Wiley-Liss, Inc.