As mice are often used to model human major histocompatibility complex (MHC
)-associated diseases, if is important to understand how their MHC regions
differ at the DNA level. The sequencing of the mouse MHC (H2 region) has en
abled a detailed map of this region to be assembled for comparison with the
human MHC. Here, Richard Allcock and colleagues outline the similarities b
etween the human and mouse MHC regions and discuss notable differences that
might affect disease models.