To better understand the pathways involved in the pathogenesis of small cel
l lung carcinoma (SCLC), we compared the patterns of molecular changes pres
ent in these tumors and their accompanying bronchial epithelium with those
present in the other two major types of lung cancer [squamous cell carcinom
a (SQC) and adenocarcinoma (ADC)I, We obtained DNA from 68 microdissected i
nvasive lung tumors (22 SCLCs, 21 ADCs, and, 25 SQCs) and 119 noncontiguous
foci of histologically normal or hyperplastic epithelia from 10 tumors of
each histological type. We determined loss of heterozygosity and microsatel
lite alterations at 12 chromosomal regions frequently deleted in lung cance
rs using 19 polymorphic microsatellite markers. Our major findings are as f
ollows: (a) the mean index of allelic loss in SCLC (0.85) and SQC (0.71) tu
mors was higher than that in ADC (0.39) tumors; (b) although there was cons
iderable overlap, each tumor type had a characteristic pattern of allelic l
oss; (c) most samples of bronchial epithelium accompanying SCLC (90%) had a
llelic loss at one or more loci compared with samples accompanying SQC (54%
) or ADC (10%); (d) the mean index of allelic loss was much higher in bronc
hial epithelial samples from SCLC (0.27) than in those from SQC (0.08) or A
DC (0.01); and (e) although the mean indices of microsatellite alterations
in the tumor types were similar, the bronchial epithelial samples accompany
ing SCLC had a 10-fold higher mean index (0.063) than those accompanying SQ
C (0.006) or ADC (0,006), Our findings indicate that extensive genetic dama
ge in the accompanying normal and hyperplastic bronchial epithelium is char
acteristic of SCLC tumors and suggest major differences in the pathogenesis
of the three major lung cancer types.