Vy. Orekhov et al., Pressure effect on the dynamics of an isolated alpha-helix studied by N-15-H-1 NMR relaxation, J BIOM NMR, 17(3), 2000, pp. 257-263
Dynamics and structure of (1-36)bacteriorhodopsin solubilized in chloroform
/methanol mixture (1:1) were investigated by H-1-N-15 NMR spectroscopy unde
r a hydrostatic pressure of 2000 bar. It was shown that the peptide retains
its spatial structure at high pressure. N-15 transverse and longitudinal r
elaxation times, N-15{H-1} nuclear Overhauser effects, chemical shifts and
the translation diffusion rate of the peptide at 2000 bar were compared wit
h the respective data at ambient pressure [Orekhov et al. (1999) J. Biomol.
NMR, 14, 345-356]. The model free analysis of the relaxation data for the
helical 9-31 fragment revealed that the high pressure decreases the overall
rotation and translation diffusion, as well as apparent order parameters o
f fast picosecond internal motions (S-f(2)) but has no effect on internal n
anosecond motions (S-s(2) and tau(s)) of the peptide. The decrease of trans
lation and overall rotation diffusion was attributed to the increase in sol
vent viscosity and the decrease of apparent order parameters S-f(2) to a co
mpression of hydrogen bonds. It is suggested that this compression causes a
n elongation of H-N bonds and a decrease of absolute values of chemical shi
ft anisotropy (CSA). In particular, the observed decrease of S-f(2) at 2000
bar can be explained by 0.001 nm increase of N-H bond lengths and 10 ppm d
ecrease of N-15 CSA values.