In the nervous system, several classes of cell-surface and extracellular ma
trix molecules have been implicated in processes such as neural growth, fas
ciculation, pathfinding, target recognition and synaptogenesis, which requi
re cell-to-cell or cell-to-substrate binding. In the developing mouse cochl
ea, little is known about the types of cell-surface and extracellular matri
x molecules existing along the neural growth paths or their possible roles
in development. Whole mount and sectioned cochlear tissue were immunolabele
d for six different adhesive molecules - neural cell adhesion molecule (NCA
M), polysialic acid (PSA), neural cell adhesion molecule L1, E-cadherin, sy
ndecan-1 and tenascin-C. A temporospatial map of adhesive molecule distribu
tion in the basal turns of the mouse cochlea was generated. Distributions o
f adhesive molecules were compared to each other and to the known progress
of neural development in the region. This comparison demonstrated differenc
es in the complements of adhesive molecules between the inner and outer hai
r cell regions, and variations in the expressions of adhesion molecules amo
ng different types of nerve fibers. In addition, developmental changes in t
he adhesive environment around and beneath the outer hair cells coincided w
ith the known timing of the appearance of morphologically defined efferent
synapses. These observations raise the possibility that molecular differenc
es at the cell surface of inner and outer hair cells are one way that ingro
wing neurites distinguish different environments to determine their growth
routes and synaptic partners in the cochlea. In addition these observations
demonstrate the potential for differential signaling of afferent and effer
ent innervation by altering the microenvironments in which synapses are for
med.