SsrA RNA of Escherichia coli, also known as 10Sa RNA or tmRNA, acts both as
tRNA and mRNA when ribosomes are paused at the 3' end of an mRNA lacking a
stop codon, This process, referred to as trans-translation, leads to the a
ddition of a short peptide tag to the C-terminus of the incomplete nascent
polypeptide. The tagged polypeptide is then degraded by C-terminal-specific
proteases, Here, we focused on endogenous targets for the SsrA system and
on a potential regulatory role of SsrA RNA. First, we show that trans-trans
lation events occur frequently in normally growing E.coli cells. More speci
fically, we report that the lacI mRNA encoding Lac repressor (LacI) is a sp
ecific natural target for trans-translation. The binding of LacI to the lac
operators results in truncated lacI mRNAs that are, in turn, recognized by
the SsrA system. The SsrA-mediated tagging and proteolysis of LacI appears
to play a role in cellular adaptation to lactose availability by supportin
g a rapid induction of Inc operon expression.