To investigate the prevalence of human polyomaviruses in Taiwan, urine
samples from immunocompetent (healthy), transient immunocompromised (
pregnant), and prolonged immunosuppressed (autoimmune disease) individ
uals were collected throughout the island. The viral DNA in the urine
was detected by the polymerase chain reaction (PCR) and Southern blot.
The viral genotypes were determined by DNA sequencing within the regu
latory region. The overall results, including cases reported previousl
y, show that 13.3% (10/75) of immunocompetent individuals, 26.0% (20/7
7) of pregnant women, and 37.5% (18/48) of autoimmune disease patients
are JCV positive. All of the immunocompetent individuals are BKV nega
tive, but 3.9% (3/77) of the pregnant women and 6.2% (3/48) of autoimm
une disease patients are BKV positive. Twenty-four percent (48/200) of
the examined urine samples were JCV positive, but only 3% (6/200) wer
e BKV positive. JCV positive individuals were mainly infected with CY
(42%) and TW-1 (52%) subtypes. These results suggest that the incidenc
e of urinary excretion of human polyomaviruses in immunosuppressed ind
ividuals is higher than that of immunocompetent individuals. The preva
lence of JCV appears to be higher than that of BKV in Taiwan. In addit
ion, CY and TW-1 are the predominant subtypes of JCV prevalent in the
Taiwanese population. (C) 1997 Wiley-Liss, Inc.