The structures and functions of the phytochrome apoprotein genes (the
PHY genes), their diversity across the plant kingdom, and their evolut
ion are central concerns in the study of red-light sensing in plants,
We summarize here recent advances in two areas relating to these topic
s: (1) the characteristics of the PHY gene family in Arabinopsis thali
ana, the higher plant species for which the most extensive information
on these genes is available, and (2) the similarity relationships, ph
ylogeny, and evolutionary implications of PHY gene sequences and parti
al sequences which have been described from various plants, Together,
these two areas of study, one directed at understanding in detail the
phytochromes present in a single species and the other directed at a m
uch broader understanding of PHY gene relatedness and distribution, ar
e producing an increasingly clear picture of the diversity and evoluti
on of plant red-light photoreceptors, Moreover, they suggest that the
complexity of the phytochrome family has increased as land plants have
evolved novel morphologies.