The Na+/Ca2+ exchanger gene NCX1 is ubiquitously expressed in mammalian tis
sues, and encodes several isoforms through alternative RNA splicing. In thi
s report, we describe the gene structure that gives rise to the multiple is
oforms, and the tissue-specific expression of these isoforms in mice. The m
ouse NCX1 gene contains a cluster of six exons (A, B, C, D, E, and Fl which
encode a variable region in the large intracellular loop of the protein, a
s previously reported in rabbits and humans. Using reverse transcription-po
lymerase chain reaction (RT-PCR), expression of the isoforms was examined i
n several tissues. We also identified a novel splice variant, which origina
te from exons A, C, D, and F. These findings provide new insights into the
significance of the large repertoire of NCX1 isoforms.