To study the existence of GB virus C/hepatitis G virus (GBV-C/HGV) variants
with different tropism, we have analyzed the heterogeneity and quasispecie
s composition of GBV-C/HGV isolated from in vitro-infected peripheral blood
mononuclear cells (PBMC) and from sera, livers, and PBMC from two chronica
lly infected patients. For this purpose, the GBV-C/HGV 5' noncoding region
(5'NCR) was amplified by reverse transcription-PCR and the amplified produc
ts were cloned and sequenced, These analyses show-ed that the master 5'NCR
sequences isolated from the in vitro-infected PBMC and from the PBMC isolat
ed from the patient whose serum was used as the inoculum were identical but
different from that of the inoculum, Furthermore, phylogenetic analysis re
vealed that all PBMC sequences grouped together into a branch which was sep
arate from those of the inoculum, For one of the two chronically infected p
atients, all the sequences from the PBMC and one from the liver clustered i
nto a single branch while the sequences from the serum and all the other li
ver sequences grouped together in the other branch. For the other patient,
the sequences from the serum and PBMC and three sequences from the liver gr
ouped together into one branch, while the remaining five sequences from the
liver were separated in a different cluster. In conclusion, our results su
pport the existence of different GBV-C/HGV variants with different tissue t
ropism.