The 1-N-naphthylphthalamic acid (NPA)-binding protein is a putative negativ
e regulator of polar auxin transport that has been shown to block auxin eff
lux from both whole plant tissues and microsomal membrane vesicles. We prev
iously showed that NPA is hydrolyzed by plasma-membrane amidohydrolases tha
t co-localize with tyrosine, proline, and tryptophan-specific aminopeptidas
es (APs) in the cotyledonary node, hypocotyl-root transition zone and root
distal elongation zone of Arabidopsis thaliana (L.) Heynh. seedlings. Moreo
ver, amino acyl-beta-naphthylamide (aa-NA) conjugates resembling NPA in str
ucture have NPA-like inhibitory activity on growth, suggesting a possible r
ole of APs in NPA action. Here we report that the same aa-NA conjugates and
the AP inhibitor bestatin also block auxin efflux from seedling tissue. Be
statin and, to a lesser extent, some aa-NA conjugates were more effective i
nhibitors of low-affinity specific [H-3]NPA-binding than were the flavonoid
s quercetin and kaempferol but had no effect on high-affinity binding. Sinc
e the APs are inhibited by flavonoids, we compared the localization of endo
genous flavonoids and APs in seedling tissue. A correlation between AP and
flavonoid localization was found in 5- to 6-d-old seedlings. Evidence that
these flavonoids regulate auxin accumulation in vivo was obtained using the
flavonoid-deficient mutant, tt4. In whole-seedling [C-14]indole-3-acetic a
cid transport studies, the pattern of auxin distribution in the tt4 mutant
was shown to be altered. The defect appeared to be in auxin accumulation, a
s a considerable amount of auxin escaped from the roots. Treatment of the t
t4 mutant with the missing intermediate naringenin restored normal auxin di
stribution and accumulation by the root. These results implicate APs and en
dogenous flavonoids in the regulation of auxin efflux.