Cellular transfection can be accomplished by the use of synthetic amphiphil
es as gene carrier system. To understand the mechanism and hence to improve
the efficiency of transfection, insight into the assembly and properties o
f the amphiphile/gene complex is crucial. Here, we have studied the interac
tion between a plasmid and cationic amphiphiles, using a monolayer techniqu
e, and have examined complex assembly by atomic force microscopy. The data
reveal a three-step mechanism for complex formation. In a first step, the p
lasmids, interacting with the monolayer, display a strong tendency of orien
tational ordering. Subsequently, individual plasmids enwrap themselves with
amphiphile molecules in a multilamellar fashion. The size of the complex f
ormed is determined by the supercoiled size of the plasmid, and calculation
s reveal that the plasmid can be surrounded by 3 to 5 bilayers of the amphi
phile. The eventual size of the transfecting complex is finally governed by
fusion events between individually wrapped amphiphile/DNA complexes. In bu
lk phase, where complex assembly is triggered by mixing amphiphilic vesicle
s and plasmids, a similar wrapping process is observed. However, in this ca
se, imperfections in this process may give rise to a partial exposure of pl
asmids, i.e., part of the plasmid is not covered with a layer of amphiphile
. We suggest that these exposed sites may act as nucleation sites for massi
ve lipoplex clustering, which in turn may affect transfection efficiency.