We describe a technique for rapid labeling of a large number of cells in th
e nervous system with many different colors. By delivering lipophilic dye-c
oated particles to neuronal preparations with a "gene gun," individual neur
ons and glia whose membranes are contacted by the particles are quickly lab
eled. Using particles that are each coated with different combinations of v
arious lipophilic dyes, many cells within a complex neuronal network can be
simultaneously labeled with a wide variety of colors. This approach is mos
t effective in living material but also labels previously fixed material. I
n living material, labeled neurons continue to show normal synaptic respons
es and undergo dendritic remodeling. This technique is thus useful for stud
ying structural plasticity of neuronal circuits in living preparations. In
addition, the Golgi-like labeling of neurons with many different colors pro
vides a novel way to study neuronal connectivity.