Evaluation of genetic variation in Lachenalia bulbifera (Hyacinthaceae) using RAPDs

Citation
R. Kleynhans et Jj. Spies, Evaluation of genetic variation in Lachenalia bulbifera (Hyacinthaceae) using RAPDs, EUPHYTICA, 115(2), 2000, pp. 141-147
Citations number
37
Categorie Soggetti
Plant Sciences
Journal title
EUPHYTICA
ISSN journal
00142336 → ACNP
Volume
115
Issue
2
Year of publication
2000
Pages
141 - 147
Database
ISI
SICI code
0014-2336(2000)115:2<141:EOGVIL>2.0.ZU;2-H
Abstract
RAPD (randomly amplified polymorphic DNA) analyses were carried out on 21 a ccessions of Lachenalia bulbifera (Cyrillo) Engl. Five pre-selected primers produced an average of 88% polymorphisms. Fifteen of the 21 accessions cou ld be identified using the five primers. In a pairwise comparison genetic d istance values ranging from 0.11 to 1.08 were obtained. These values reveal a high amount of variation within the species. The genetic distance values within the tetraploid and hexaploid groups on the south coast were low, bu t values were high between the groups on the south coast and those on the w est coast. A dendogram was constructed from the RAPD banding profiles, usin g UPGM cluster analysis. The dendogram clusters certain accessions together . These clusters are supported by their geographical locality and chromosom e data. The hexaploid group, tetraploid group and octoploid group on the so uth coast are respectively clustered together. It is concluded that RAPDs c an be used to assess the genetic variation at an intra-specific level in La chenalia.