Bridging the gap: A set of selective H-1-N-15-correlations to link sequential neighbors of prolines

Citation
M. Schubert et al., Bridging the gap: A set of selective H-1-N-15-correlations to link sequential neighbors of prolines, J BIOM NMR, 17(4), 2000, pp. 331-335
Citations number
20
Categorie Soggetti
Biochemistry & Biophysics
Journal title
JOURNAL OF BIOMOLECULAR NMR
ISSN journal
09252738 → ACNP
Volume
17
Issue
4
Year of publication
2000
Pages
331 - 335
Database
ISI
SICI code
0925-2738(200008)17:4<331:BTGASO>2.0.ZU;2-R
Abstract
Triple-resonance experiments are standard in the assignment of protein spec tra. Conventional assignment strategies use H-1-N-15-correlations as a star ting point and therefore have problems when proline appears in the amino ac id sequence, which lacks a signal in these correlations. Here we present a set of amino acid selective pulse sequences which provide the information t o link the amino acid on either side of proline residues and thus complete the sequential assignment. The experiments yield amino acid type selective H-1-N-15-correlations which contain signals from the amino protons of the r esidues either preceding or following proline in the amino acid sequence. T hese protons are correlated with their own nitrogen or with that of the pro line. The new experiments are recorded as two-dimensional experiments and t heir performance is demonstrated by application to a 115-residue protein do main.