Fluorescence microscopy, in combination with atomic force microscopy (AFM),
reveals that rhodamine-labeled lysozyme adsorbs strongly from aqueous solu
tion to polishing marks of nanometer depths on fused silica surfaces. The f
luorescence and topographical images correspond closely. Fluorescence inten
sity varies by as much as a-fold over the same region where the topography
varies over 2.5 nm. Desorption of lysozyme from the surface occurs on rinsi
ng with solutions of increased ionic strength or decreased pH, showing that
reducing the Coulombic attraction enhances desorption. Different polishing
marks behave differently with respect to desorption: the fluorescence patt
ern on the surface changes when the ionic strength of the rinsing solution
reaches 0.1 M, indicating that some polishing marks are more strongly adsor
ptive than are others. The desorption depends on pH, which is consistent wi
th the known variation in the charge of silica surface. A superpolished sil
ica photomask, which has significantly fewer polishing marks on the nanomet
er scale, has significantly less adsorption of lysozyme, suggesting that th
e topography on the nanometer scale influences adsorption.