Jg. Bertram et al., Molecular mechanism and energetics of clamp assembly in Escherichia coli -The role of ATP hydrolysis when gamma complex loads beta on DNA, J BIOL CHEM, 275(37), 2000, pp. 28413-28420
Escherichia coli DNA polymerase III holoenzyme is a multisubunit composite
containing the beta sliding clamp and clamp loading gamma complex. The gamm
a complex requires ATP to load beta onto DNA. A two-color fluorescence spec
troscopic approach was utilized to study this system, wherein both assembly
(red fluorescence; X-rhodamine labeled DNA anisotropy assay) and ATP hydro
lysis (green fluorescence; phosphate binding protein assay) were simultaneo
usly measured with millisecond timing resolution. The two temporally correl
ated stopped-flow signals revealed that a preassembled beta.gamma complex c
omposite rapidly binds primer/template DNA in an ATP hydrolysis independent
step. Once bound, two molecules of ATP are rapidly hydrolyzed (similar to
34 s(-1)). Following hydrolysis, gamma complex dissociates from the DNA (si
milar to 22 s(-1)). Once dissociated, the next cycle of loading is severely
compromised, resulting in steady-state ATP hydrolysis rates with a maximum
of only similar to 3 s(-1). Two single-site beta dimer interface mutants w
ere examined which had impaired steady-state rates of ATP hydrolysis. The p
re-steady-state correlated kinetics of these mutants revealed a pattern ess
entially identical to wild type. The anisotropy data showed that these muta
nts decrease the steady-state rates of ATP hydrolysis by causing a buildup
of "stuck" binary-ternary complexes on the primer/template DNA.