We studied the expression and distribution of Na/HCO3 cotransporters in rat
brain using polynucleotide probes and polyclonal antibodies derived from t
he electrogenic rat kidney Na/HCO3 cotransporter (rkNBC). In whole brain, w
e observed a single mRNA (similar to 7.5 kb) by Northern hybridization and
a major similar to 130 kDa protein by immunoblotting with a polyclonal anti
serum directed against the C terminus of rkNBC. NBC mRNA and protein were p
resent in cortex, brainstem-diencephalon, and cerebellum. In situ hybridiza
tion revealed NBC mRNA expression throughout the CNS, with particularly hig
h levels in olfactory bulb, hippocampal dentate gyrus, and cerebellum. NBC
mRNA was present in glial cells (e.g., Bergmann glia of cerebellum and hipp
ocampal astrocytes) and neurons (e.g., granule cells of dentate gyrus and n
eurons of cortex or striatum). Double hybridization of mRNA encoding NBC an
d glutamate transporter 1 (glial marker) confirmed that both glia and neuro
ns express NBC. Indirect immunofluorescence microscopy demonstrated NBC pro
tein throughout the CNS, particularly in hippocampus and cerebellum. Althou
gh NBC mRNA was restricted to cell bodies, NBC protein was distributed diff
usely, compatible with a localization in cell processes and perhaps cell bo
dies. Double labeling with glial fibrillary acidic protein (astrocytic mark
er), microtubule-associated protein 2 (neuronal marker), or 2',3'-cyclic mo
nonucleotide 3'-phosphodiesterase (oligodendrocytic marker) demonstrated ex
pression of NBC protein in specific subpopulations of both glia and neurons
. Moreover, NBC protein was present in both cultured hippocampal astrocytes
and cortical neurons. NBC mRNA and protein were also present in epithelial
cells of choroid plexus, ependyma, and meninges. Our results are thus cons
istent with multiple novel roles for Na/HCO3 cotransport in CNS physiology.