Novel analogues of the cell-penetrating peptides penetratin and transportan
were synthesized. The distribution of the biotin-labeled peptides in Bowes
melanoma cell line has been investigated by indirect fluorescence with flu
orescein-streptavidin detection. The time course of uptake of I-125-labeled
transportan analogues has been characterized in the same cell line. Molecu
lar modeling was used to analyze the penetration and the orientation of mol
ecules in a simulated biological membrane. The results, both from molecular
modeling and fluorescence studies, imply that penetratin and transportan d
o not enter the cells by related mechanisms and that they do not belong to
the same family of translocating peptides.