Membrane proteins present a hydrophobic surface to the surrounding lipid, w
hereas portions protruding into the aqueous milieu expose a polar surface.
But how have proteins evolved to deal with the complex environment at the m
embrane-water interface? Some insights have been provided by high-resolutio
n structures of membrane proteins, and recent studies of the role of indivi
dual amino acids in mediating protein-lipid contacts have shed further ligh
t on this issue. It now appears clear that the polar-aromatic residues Trp
and Tyr have a specific affinity for a region near the lipid carbonyls, whe
reas positively charged residues extend into the lipid phosphate region.