The binding mechanism of Congo red (CR) to Alzheimer's disease (AD) amyloid
fibrils (A beta) in terms of binding affinity and number of sites was quan
titated from absorption spectroscopy (at 200-700 nm) by measuring the conce
ntration of CR bound (CR-B) to AD A beta assemblies as a function of CR con
centration and pH in 80% ethanol. The rationale for the use of this high co
ncentration of ethanol derives from its use in histological screens for amy
loid in tissue sections. Moreover, free CR can be separated from bound CR b
y filtration in ethanolic but not aqueous medium. The A beta analogs studie
d here included: (1) peptides having different lengths: A beta 1-40, A beta
11-28, A beta 13-28, A beta 19-28, A beta 11-25; (2) wildtype, control seq
uences of A beta 1- 40 and sequences having different natural amino acid su
bstitutions: primate Pr1-40, rodent Ro1-40, hereditary cerebral haemorrhage
with amyloidosis, Dutch type (HCHWA-D) Du1-40, primate reverse sequence Pr
40-1; and (3) A beta 11-25 sequences having different substitutions: H13D,
H14D, and D23K. Negative-staining showed that A beta 1-40 fibrils in buffer
were indistinguishable om those in buffered ethanolic medium. For all amyl
oid analogs except A beta 19-28, which has no histidine residues and showed
no CR binding over the entire pH range 4.0-9.5, CR-B decreased as a functi
on of increasing pH. The decrease was steepest at about pH 5 and became zer
o above pH 7. For analogs having the same number of histidines, CR-B fell o
n the same binding curve, indicating that histidine residues are the likely
binding sites for CR in this medium. The pH titration of the binding was p
arameterized by the stoichiometry of dye to the sites, the number of histid
ines per molecule, the binding dissociation constant K-d, and the apparent
proton dissociation constant pK of the histidine; and the calculated pH-tit
ration curves were found to fit the observed ones. For the peptides having
1-3 histidines the average pK was 5.0-5.5, which was similar to the expecte
d pK of histidine in low dielectric medium (80% ethanol), and the K-d's wer
e 2.8-5.9 mu M. That histidine residues underlie CR binding in A beta amylo
id is consistent with previous findings that A beta peptides sediment as fi
brillar assemblies at pH similar to 3-7 and bind Congo red over the same pH
range in aqueous medium. Further the conformation near the binding motif H
is13-His14-Gln15-Lys16 in A beta assemblies is not greatly altered in 80% e
thanol.