PCR assays that identify the grapevine dieback fungus Eutypa lata

Citation
P. Lecomte et al., PCR assays that identify the grapevine dieback fungus Eutypa lata, APPL ENVIR, 66(10), 2000, pp. 4475-4480
Citations number
36
Categorie Soggetti
Biology,Microbiology
Journal title
APPLIED AND ENVIRONMENTAL MICROBIOLOGY
ISSN journal
00992240 → ACNP
Volume
66
Issue
10
Year of publication
2000
Pages
4475 - 4480
Database
ISI
SICI code
0099-2240(200010)66:10<4475:PATITG>2.0.ZU;2-I
Abstract
Eutypa lata is the causal fungal agent of Eutypa dieback, a serious grapevi ne necrotic disease. The erratic and delayed (1 to 2 months) appearance of characteristic conidia on culture media and the presence of numerous microo rganisms in decaying wood make it difficult either to identify or to detect E. lata in grapevine wood samples. We designed six pairs of PCR primers fo r diagnosis of E. lata, Three primer pairs were derived from ribosomal DNA internal transcribed spacer sequences, and three pairs were derived from ra ndomly amplified polymorphic DNA fragments. The six primer pairs could be u sed to amplify DNAs extracted from all of the E, E. lata isolates tested. T hey did not amplify DNAs from fungi and bacteria representing more than 50 different species of microorganisms associated with grapevine. We developed a simple protocol, leading to a rapid release of DNA, that enabled us to i dentify E. lata from pure or mixed cultures as well as from grapevine wood samples. Identification of E, lata in wood was achieved within a few hours, instead of the several weeks required for classical cultures on agar mediu m. We believe that the procedure described here can be adapted to detect ot her microorganisms involved in woody plant diseases.